How to Load Variant Specific Data ?

1. Enter a variant CPRA ID or rs ID

To load variant specific data, enter a variant CPRA ID (chromosome number, position of the variant, reference allele, and the alternative allele) into the ‘Variant’ field on the left, shown in figure 1 (e.g. 10-114758349-C-T).

Alternatively, enter an rs ID number from the dbSNP database, e.g rs7903146. If more than one variant is associated with the rs ID, a pop up window will prompt you to select one of the matching options.

^{Figure 1. Getting started in Variant View}

2. Check or amend your release settings

Release – Check the pre-selected release (e.g. from the Browse Datasets tool), or select the required release using the release selection options.

Ensembl – View the reference used by the dataset.

Previous: What is Variant View?

Next: How to View the Initial Forest Plot ?